Pdf LigDig : web application

Uploader: Michael Martinez

Contributor: Michael Martinez

Other contributors: Not specified

Version: 1

Projects: F3: Kinetic data handling

Scales: Not specified

Presentation VLN Retreat

Created: 28th Nov 2012 at 09:11


Pdf LigDig: a web server for querying ligand–protein interactions

Uploader: Antonia Stank

Contributor: Antonia Stank, Jonathan Fuller, Michael Martinez, Rebecca Wade

Other contributors: Stefan Henrich, Stefan Richter

Scales: Not specified

Background: One of the major challenges in complex multi-disciplinary systems biology projects is to understand and process data from a wide variety of data sources. Computational tools to assist in the analysis of this data are essential.
Method: LigDig is a web server designed to answer questions that previously required several independent queries to diverse data sources. It also performs basic manipulations and analyses of the structures of protein–ligand complexes. The LigDig webserver is

Created: 15th Jan 2016 at 13:49


Ppt LPS showcase - Introduction

Uploader: Katja Breitkopf-Heinlein

Contributor: Katja Breitkopf-Heinlein

Other contributors: Not specified

Version: 1

Projects: Showcase LPS and Inflammation

Scales: Not specified

No description specified

Created: 4th Apr 2012 at 12:43   Last updated: 4th Apr 2012 at 13:00


Ppt LPS Showcase: Mathematical modelling of LPS induced liver inflammation

Uploader: Katja Breitkopf-Heinlein

Contributor: Iryna Ilkavets, Johannes Bode, Katja Breitkopf-Heinlein, Marcus Klein, Maria Thomas, Steven Dooley, Ulrich Zanger, Ute Albrecht

Other contributors: Not specified

Scales: Cell

This poster presents a sub-section of new results that were created within this Showcase. It's focus is on hepatic stellate cells (HSC). Unexpectedly, LPS reduced expression of the activation marker αSMA and other pro-fibrogenic genes in HSC, a finding which challenges the common hypothesis of LPS being an activator of quiescent HSC.

Created: 10th Jul 2012 at 09:37   Last updated: 25th Jul 2012 at 13:17

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