Pdf Bridging Experiments and Modelling: The SABIO-RK Reaction Kinetics Database

Uploader: Martin Golebiewski

Contributor: Martin Golebiewski

Other contributors: Not specified

Version: 1

Projects: F3: Kinetic data handling

Scales: Not specified

Talk at the COMBINE 2012 meeting

Created: 9th Oct 2012 at 10:35


Pdf Building a liver knowledgebase: ontology-based representation of liver biochemical processes and their evidence

Uploader: Christian Bölling

Contributor: Christian Bölling, Hermann-Georg Holzhütter, Michael Weidlich

Other contributors: Not specified

Version: 1

Projects: F2: The Liver Knowledge Base (LKB)

Scales: Cell, Intercellular, Liver lobule, Liver and Organism

Computational approaches to study biochemistry require machine accessible representations of biochemical knowledge. Based on the requirements for assembling, managing and analysing genome-scale constraint-based models of liver metabolism we developed a semantic data model for representation of liver biochemical knowledge. Employing a role-based representation of biochemical processes as molecular events specified in the Web Ontology Language (OWL) we here outline an information model that employs

Created: 13th Jul 2012 at 16:24

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